Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm27892-201ENSMUST00000185017 106 ntBASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.56□□□□□ -0.4
Trim16Q99PP9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.56□□□□□ -0.4
Trim16Q99PP9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim16Q99PP9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.55□□□□□ -0.4
Trim16Q99PP9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.55□□□□□ -0.4
Trim16Q99PP9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim16Q99PP9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Mir1894-201ENSMUST00000122802 81 ntBASIC12.55□□□□□ -0.4
Trim16Q99PP9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.55□□□□□ -0.4
Trim16Q99PP9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim16Q99PP9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm6447-201ENSMUST00000118905 835 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms