Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Gm18489-201ENSMUST00000172565 551 ntBASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Gm18032-201ENSMUST00000222541 538 ntBASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 AC154352.1-201ENSMUST00000221477 2365 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Gm6623-201ENSMUST00000173570 544 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gtf2a1Q99PM3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms