Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh15Q99PJ1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Gm4862-201ENSMUST00000170405 438 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Gm4310-201ENSMUST00000177847 889 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Gm8531-201ENSMUST00000188319 893 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdh15Q99PJ1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm4654-201ENSMUST00000183305 982 ntBASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm38151-201ENSMUST00000195085 289 ntBASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm5714-201ENSMUST00000197343 566 ntBASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm18463-201ENSMUST00000207258 474 ntBASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm18460-201ENSMUST00000208088 464 ntBASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms