Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm7809-201ENSMUST00000153199 742 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm6222-202ENSMUST00000182143 629 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm7399-201ENSMUST00000032395 858 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm43118-201ENSMUST00000199149 775 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2ird2Q99NI3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms