Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Gm29199-201ENSMUST00000187766 775 ntBASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b1Q99NB9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b1Q99NB9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm31256-201ENSMUST00000194705 506 ntBASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sf3b1Q99NB9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sf3b1Q99NB9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms