Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Gm28631-201ENSMUST00000190740 334 ntBASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Gm44397-201ENSMUST00000195950 113 ntBASIC12.09□□□□□ -0.47
Nkd1Q99MH6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Gm6458-201ENSMUST00000211573 635 ntBASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Gm6983-201ENSMUST00000214912 628 ntBASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Itm2b-204ENSMUST00000228637 783 ntBASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkd1Q99MH6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gm16372-201ENSMUST00000073088 450 ntBASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkd1Q99MH6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkd1Q99MH6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkd1Q99MH6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkd1Q99MH6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkd1Q99MH6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms