Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.27□□□□□ -0.6
Scrt1Q99M85 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scrt1Q99M85 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm16202-201ENSMUST00000117532 544 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm11439-201ENSMUST00000118598 409 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm14277-201ENSMUST00000121195 360 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm13316-201ENSMUST00000140537 691 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.27□□□□□ -0.61
Scrt1Q99M85 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm30285-201ENSMUST00000214614 422 ntBASIC11.27□□□□□ -0.61
Scrt1Q99M85 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scrt1Q99M85 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Gm14028-201ENSMUST00000117434 479 ntBASIC11.26□□□□□ -0.61
Scrt1Q99M85 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.26□□□□□ -0.61
Scrt1Q99M85 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.26□□□□□ -0.61
Scrt1Q99M85 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Gm29787-201ENSMUST00000222129 849 ntBASIC11.26□□□□□ -0.61
Scrt1Q99M85 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms