Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdk5rap3Q99LM2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdk5rap3Q99LM2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk5rap3Q99LM2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk5rap3Q99LM2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Gm28693-202ENSMUST00000190758 331 ntBASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms