Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.4□□□□□ -0.42
Cstf3Q99LI7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.4□□□□□ -0.42
Cstf3Q99LI7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cstf3Q99LI7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cstf3Q99LI7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cstf3Q99LI7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Cstf3Q99LI7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cstf3Q99LI7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.4□□□□□ -0.43
Cstf3Q99LI7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cstf3Q99LI7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Gm7287-201ENSMUST00000205267 602 ntBASIC12.39□□□□□ -0.43
Cstf3Q99LI7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cstf3Q99LI7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms