Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm23200-201ENSMUST00000104379 132 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm12015-201ENSMUST00000117065 843 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm13813-201ENSMUST00000120998 787 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm6963-201ENSMUST00000147879 379 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm28882-201ENSMUST00000185504 314 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Gm32999-201ENSMUST00000192693 562 ntBASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Gm43947-201ENSMUST00000203019 959 ntBASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd2Q99JR8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Gm13315-201ENSMUST00000120376 991 ntBASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.91□□□□□ -0.34
Smarcd2Q99JR8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms