Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1bQ920F6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smc1bQ920F6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Gm14350-201ENSMUST00000116642 640 ntBASIC14.82□□□□□ -0.04
Smc1bQ920F6 Gm14263-201ENSMUST00000117955 746 ntBASIC14.82□□□□□ -0.04
Smc1bQ920F6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Gm3890-201ENSMUST00000182416 207 ntBASIC14.82□□□□□ -0.04
Smc1bQ920F6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.82□□□□□ -0.04
Smc1bQ920F6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.82□□□□□ -0.04
Smc1bQ920F6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1bQ920F6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.81□□□□□ -0.04
Smc1bQ920F6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.81□□□□□ -0.04
Smc1bQ920F6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.81□□□□□ -0.04
Smc1bQ920F6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.81□□□□□ -0.04
Smc1bQ920F6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc1bQ920F6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc1bQ920F6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smc1bQ920F6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc1bQ920F6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc1bQ920F6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms