Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm43981-201ENSMUST00000203285 1467 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm14503-201ENSMUST00000130337 1164 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm44422-201ENSMUST00000204142 1025 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm44712-201ENSMUST00000206250 1076 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb20Q91XZ9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm12697-201ENSMUST00000118008 667 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm5687-201ENSMUST00000118252 640 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm3307-201ENSMUST00000176164 632 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm3052-201ENSMUST00000186409 829 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm19211-201ENSMUST00000200251 1206 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm5885-202ENSMUST00000203357 528 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 CT009733.1-203ENSMUST00000224033 451 ntBASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr844-201ENSMUST00000054106 930 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms