Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb6Q91XZ4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Gm43818-201ENSMUST00000200605 466 ntBASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Gm10268-201ENSMUST00000085340 555 ntBASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb6Q91XZ4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm15703-201ENSMUST00000120250 880 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm1335-201ENSMUST00000121653 386 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm8602-201ENSMUST00000184045 607 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm38092-201ENSMUST00000195600 653 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm26035-201ENSMUST00000083065 308 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb6Q91XZ4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms