Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gm15806-201ENSMUST00000120696 955 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gm6152-201ENSMUST00000151704 340 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gm44069-201ENSMUST00000204898 506 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Map1b-203ENSMUST00000223725 2669 ntBASIC12.44□□□□□ -0.42
Pcdhga11Q91XY8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm14350-201ENSMUST00000116642 640 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm25927-201ENSMUST00000175058 117 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm9002-201ENSMUST00000178437 499 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm28911-201ENSMUST00000188837 117 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga11Q91XY8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms