Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Gm13315-201ENSMUST00000120376 991 ntBASIC14.66□□□□□ -0.06
Trex1Q91XB0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trex1Q91XB0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Gm12217-201ENSMUST00000118858 696 ntBASIC14.65□□□□□ -0.06
Trex1Q91XB0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Mir5120-201ENSMUST00000175020 78 ntBASIC14.65□□□□□ -0.06
Trex1Q91XB0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Gm43138-201ENSMUST00000199123 708 ntBASIC14.65□□□□□ -0.06
Trex1Q91XB0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Gzmn-202ENSMUST00000225535 989 ntBASIC14.65□□□□□ -0.06
Trex1Q91XB0 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.65□□□□□ -0.06
Trex1Q91XB0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Gm10312-201ENSMUST00000078515 489 ntBASIC14.65□□□□□ -0.06
Trex1Q91XB0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.65□□□□□ -0.06
Trex1Q91XB0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trex1Q91XB0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm7857-201ENSMUST00000117957 358 ntBASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm11597-201ENSMUST00000121423 964 ntBASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.64□□□□□ -0.07
Trex1Q91XB0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm44651-201ENSMUST00000207343 372 ntBASIC14.64□□□□□ -0.07
Trex1Q91XB0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.64□□□□□ -0.07
Trex1Q91XB0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.64□□□□□ -0.07
Trex1Q91XB0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms