Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.28□□□□□ -0.28
Ddx1Q91VR5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ddx1Q91VR5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx1Q91VR5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx1Q91VR5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx1Q91VR5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm29396-201ENSMUST00000185659 716 ntBASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm37986-201ENSMUST00000193285 383 ntBASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Olfr284-202ENSMUST00000206647 966 ntBASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm45865-201ENSMUST00000211815 945 ntBASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx1Q91VR5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Gm22018-201ENSMUST00000104357 131 ntBASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Gm13813-201ENSMUST00000120998 787 ntBASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Gm2383-201ENSMUST00000181461 807 ntBASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx1Q91VR5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx1Q91VR5 Gm13369-201ENSMUST00000119442 987 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms