Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.69□□□□□ -0.22
TraipQ8VIG6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TraipQ8VIG6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Gm6082-201ENSMUST00000215204 454 ntBASIC13.69□□□□□ -0.22
TraipQ8VIG6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.69□□□□□ -0.22
TraipQ8VIG6 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.69□□□□□ -0.22
TraipQ8VIG6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.69□□□□□ -0.22
TraipQ8VIG6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm24830-201ENSMUST00000102024 166 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm13875-201ENSMUST00000120162 282 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm25890-201ENSMUST00000177643 165 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm22614-201ENSMUST00000178300 165 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm22042-201ENSMUST00000082989 165 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm26232-201ENSMUST00000083360 166 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm24136-201ENSMUST00000083374 165 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm26110-201ENSMUST00000083971 165 ntBASIC13.68□□□□□ -0.22
TraipQ8VIG6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TraipQ8VIG6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms