Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Gm44855-201ENSMUST00000205725 362 ntBASIC13.27□□□□□ -0.29
Trim60Q8VI40 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.27□□□□□ -0.29
Trim60Q8VI40 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.27□□□□□ -0.29
Trim60Q8VI40 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.27□□□□□ -0.29
Trim60Q8VI40 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.26□□□□□ -0.29
Trim60Q8VI40 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Gm37917-201ENSMUST00000194711 392 ntBASIC13.26□□□□□ -0.29
Trim60Q8VI40 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim60Q8VI40 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Mir6392-201ENSMUST00000184924 108 ntBASIC13.25□□□□□ -0.29
Trim60Q8VI40 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Gm18624-201ENSMUST00000220966 658 ntBASIC13.25□□□□□ -0.29
Trim60Q8VI40 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.25□□□□□ -0.29
Trim60Q8VI40 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim60Q8VI40 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim60Q8VI40 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms