Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.97□□□□□ -0.33
Slf1Q8R3P9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Gm27306-201ENSMUST00000183970 107 ntBASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Gm44872-201ENSMUST00000207864 420 ntBASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Slf1Q8R3P9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.96□□□□□ -0.34
Slf1Q8R3P9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Slf1Q8R3P9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Gm6912-201ENSMUST00000117218 544 ntBASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slf1Q8R3P9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slf1Q8R3P9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.94□□□□□ -0.34
Slf1Q8R3P9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms