Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Gm43179-201ENSMUST00000198797 275 ntBASIC11.9□□□□□ -0.5
Rfc3Q8R323 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Gm6013-201ENSMUST00000212264 699 ntBASIC11.9□□□□□ -0.5
Rfc3Q8R323 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfc3Q8R323 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Rfc3Q8R323 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Rfc3Q8R323 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rfc3Q8R323 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rfc3Q8R323 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.9□□□□□ -0.51
Rfc3Q8R323 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rfc3Q8R323 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.89□□□□□ -0.51
Rfc3Q8R323 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Gm38002-201ENSMUST00000193255 180 ntBASIC11.89□□□□□ -0.51
Rfc3Q8R323 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.89□□□□□ -0.51
Rfc3Q8R323 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.89□□□□□ -0.51
Rfc3Q8R323 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfc3Q8R323 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Gm16479-201ENSMUST00000121706 932 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.88□□□□□ -0.51
Rfc3Q8R323 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Gm25927-201ENSMUST00000175058 117 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 Gm27516-201ENSMUST00000184237 98 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfc3Q8R323 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.88□□□□□ -0.51
Rfc3Q8R323 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms