Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim29Q8R2Q0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim29Q8R2Q0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim29Q8R2Q0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gm12291-201ENSMUST00000121627 311 ntBASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gm16479-201ENSMUST00000121706 932 ntBASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gm24644-201ENSMUST00000157114 139 ntBASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gm5035-201ENSMUST00000215581 927 ntBASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim29Q8R2Q0 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.65□□□□□ -0.06
Trim29Q8R2Q0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trim29Q8R2Q0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm14127-201ENSMUST00000117906 678 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm13813-201ENSMUST00000120998 787 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm29649-201ENSMUST00000185649 419 ntBASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim29Q8R2Q0 Gm29705-201ENSMUST00000212598 474 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms