Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rfwd3Q8CIK8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rfwd3Q8CIK8 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.08□□□□□ -0.47
Rfwd3Q8CIK8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Gm26927-201ENSMUST00000182385 965 ntBASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Gm10146-201ENSMUST00000072739 309 ntBASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfwd3Q8CIK8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm13226-201ENSMUST00000117838 404 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfwd3Q8CIK8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfwd3Q8CIK8 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms