Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Gm12091-201ENSMUST00000146791 830 ntBASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Gm8515-201ENSMUST00000194852 576 ntBASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Gm38671-201ENSMUST00000200573 130 ntBASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Gm8213-201ENSMUST00000118191 441 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Gm13123-201ENSMUST00000122173 492 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Gm45384-201ENSMUST00000210451 277 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc38Q8CDN8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc38Q8CDN8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Gm14928-201ENSMUST00000120198 477 ntBASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Gm23984-201ENSMUST00000157139 203 ntBASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc38Q8CDN8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms