Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcpip1Q8CDG3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcpip1Q8CDG3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Gm5035-201ENSMUST00000215581 927 ntBASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.79□□□□□ -0.2
Vcpip1Q8CDG3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Gm27892-201ENSMUST00000185017 106 ntBASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.78□□□□□ -0.2
Vcpip1Q8CDG3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Vcpip1Q8CDG3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Vcpip1Q8CDG3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vcpip1Q8CDG3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vcpip1Q8CDG3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Gm28911-201ENSMUST00000188837 117 ntBASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcpip1Q8CDG3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.76□□□□□ -0.21
Vcpip1Q8CDG3 Mir686-201ENSMUST00000102174 109 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms