Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gm38223-201ENSMUST00000194484 695 ntBASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lysmd4Q8CC84 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Paupar-201ENSMUST00000194826 3482 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Mir7684-201ENSMUST00000183858 60 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Gm27306-201ENSMUST00000183970 107 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Gm20445-201ENSMUST00000061905 565 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lysmd4Q8CC84 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms