Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm14921-201ENSMUST00000118643 908 ntBASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm3890-201ENSMUST00000182416 207 ntBASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc60Q8C4J0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc60Q8C4J0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc60Q8C4J0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc60Q8C4J0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm38092-201ENSMUST00000195600 653 ntBASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm37008-201ENSMUST00000195712 319 ntBASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc60Q8C4J0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms