Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gm8602-201ENSMUST00000184045 607 ntBASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Gm7029-201ENSMUST00000173226 450 ntBASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf3Q8C120 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Gm14704-201ENSMUST00000120300 874 ntBASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms