Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Mir433-201ENSMUST00000093564 124 ntBASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sh3rf2Q8BZT2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gm12058-201ENSMUST00000118614 437 ntBASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf2Q8BZT2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms