Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.99□□□□□ -0.33
Usp43Q8BUM9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp43Q8BUM9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.99□□□□□ -0.33
Usp43Q8BUM9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp43Q8BUM9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp43Q8BUM9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp43Q8BUM9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp43Q8BUM9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Usp43Q8BUM9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gm6266-201ENSMUST00000203844 806 ntBASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.98□□□□□ -0.33
Usp43Q8BUM9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp43Q8BUM9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp43Q8BUM9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp43Q8BUM9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms