Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.55□□□□□ -0.72
Smg1Q8BKX6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm13492-201ENSMUST00000119772 665 ntBASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm4654-201ENSMUST00000183305 982 ntBASIC10.55□□□□□ -0.72
Smg1Q8BKX6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm7904-201ENSMUST00000217049 465 ntBASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smg1Q8BKX6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm19009-201ENSMUST00000223072 823 ntBASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm20414-201ENSMUST00000172918 646 ntBASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms