Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm14350-201ENSMUST00000116642 640 ntBASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm15371-201ENSMUST00000117057 784 ntBASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm12341-201ENSMUST00000119724 503 ntBASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm20949-201ENSMUST00000206478 952 ntBASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm19220-201ENSMUST00000222682 803 ntBASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Gm44855-201ENSMUST00000205725 362 ntBASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2bQ8BJF9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm18307-201ENSMUST00000206864 949 ntBASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm6983-201ENSMUST00000214912 628 ntBASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2bQ8BJF9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms