Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc40Q8BI79 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc40Q8BI79 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Gm12928-201ENSMUST00000117115 573 ntBASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Gm12091-201ENSMUST00000146791 830 ntBASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Gm8463-201ENSMUST00000208573 613 ntBASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Gm16372-201ENSMUST00000073088 450 ntBASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms