Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm27486-201ENSMUST00000184923 80 ntBASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn3Q8BHH8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clrn3Q8BHH8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clrn3Q8BHH8 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.08□□□□□ -0.47
Clrn3Q8BHH8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clrn3Q8BHH8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clrn3Q8BHH8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clrn3Q8BHH8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clrn3Q8BHH8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm12138-201ENSMUST00000122180 951 ntBASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm11978-201ENSMUST00000122315 466 ntBASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm10156-201ENSMUST00000122364 462 ntBASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn3Q8BHH8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms