Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim6Q8BGE7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Gm27306-201ENSMUST00000183970 107 ntBASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Gm9797-201ENSMUST00000052902 613 ntBASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim6Q8BGE7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.64□□□□□ -0.23
Trim6Q8BGE7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.63□□□□□ -0.23
Trim6Q8BGE7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Gm42550-201ENSMUST00000201553 960 ntBASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.63□□□□□ -0.23
Trim6Q8BGE7 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim6Q8BGE7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms