Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctdp1Q7TSG2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Gm12485-201ENSMUST00000119641 291 ntBASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Gm18624-201ENSMUST00000220966 658 ntBASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctdp1Q7TSG2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctdp1Q7TSG2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ctdp1Q7TSG2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms