Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TwistnbQ78WZ7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Map1b-203ENSMUST00000223725 2669 ntBASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Gm38294-201ENSMUST00000192831 381 ntBASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TwistnbQ78WZ7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TwistnbQ78WZ7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TwistnbQ78WZ7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms