Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm43138-201ENSMUST00000199123 708 ntBASIC13.35□□□□□ -0.27
Cspg5Q71M36 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cspg5Q71M36 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg5Q71M36 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.34□□□□□ -0.27
Cspg5Q71M36 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.34□□□□□ -0.27
Cspg5Q71M36 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg5Q71M36 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cspg5Q71M36 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.33□□□□□ -0.28
Cspg5Q71M36 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Gm13297-201ENSMUST00000120205 934 ntBASIC13.33□□□□□ -0.28
Cspg5Q71M36 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Mospd4-201ENSMUST00000180618 576 ntBASIC13.33□□□□□ -0.28
Cspg5Q71M36 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.33□□□□□ -0.28
Cspg5Q71M36 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Cspg5Q71M36 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg5Q71M36 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms