Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp49Q6P9L4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gm12390-201ENSMUST00000117897 397 ntBASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gm29649-201ENSMUST00000185649 419 ntBASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Gm9899-201ENSMUST00000065519 555 ntBASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp49Q6P9L4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Gm27682-201ENSMUST00000183930 110 ntBASIC14.34□□□□□ -0.11
Usp49Q6P9L4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Gm19163-201ENSMUST00000223313 780 ntBASIC14.34□□□□□ -0.11
Usp49Q6P9L4 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp49Q6P9L4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp49Q6P9L4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp49Q6P9L4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp49Q6P9L4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 705.7 ms