Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Gm27731-201ENSMUST00000185192 107 ntBASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Casc4Q6P2L7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13□□□□□ -0.33
Casc4Q6P2L7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13□□□□□ -0.33
Casc4Q6P2L7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Gm7553-201ENSMUST00000185805 1426 ntBASIC13□□□□□ -0.33
Casc4Q6P2L7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Gm12384-201ENSMUST00000119228 919 ntBASIC13□□□□□ -0.33
Casc4Q6P2L7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Gm45784-201ENSMUST00000188360 142 ntBASIC13□□□□□ -0.33
Casc4Q6P2L7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13□□□□□ -0.33
Casc4Q6P2L7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13□□□□□ -0.33
Casc4Q6P2L7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Casc4Q6P2L7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Mir1982-201ENSMUST00000157368 74 ntBASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.99□□□□□ -0.33
Casc4Q6P2L7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms