Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scube3Q66PY1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scube3Q66PY1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scube3Q66PY1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scube3Q66PY1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scube3Q66PY1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scube3Q66PY1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Scube3Q66PY1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scube3Q66PY1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Gm8062-201ENSMUST00000139696 444 ntBASIC13.58□□□□□ -0.24
Scube3Q66PY1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Gm29288-201ENSMUST00000191582 901 ntBASIC13.58□□□□□ -0.24
Scube3Q66PY1 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.58□□□□□ -0.24
Scube3Q66PY1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.58□□□□□ -0.24
Scube3Q66PY1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scube3Q66PY1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Snord83b-201ENSMUST00000104546 94 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm14704-201ENSMUST00000120300 874 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm22121-201ENSMUST00000175148 54 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm26736-201ENSMUST00000180425 1236 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm17790-201ENSMUST00000191545 1228 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm37008-201ENSMUST00000195712 319 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm43316-201ENSMUST00000197252 1295 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm32025-201ENSMUST00000217960 307 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.57□□□□□ -0.24
Scube3Q66PY1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scube3Q66PY1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scube3Q66PY1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms