Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clcn1Q64347 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clcn1Q64347 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Clcn1Q64347 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn1Q64347 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn1Q64347 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.27■□□□□ 0.2
Clcn1Q64347 Mir6927-201ENSMUST00000184494 71 ntBASIC16.27■□□□□ 0.2
Clcn1Q64347 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.27■□□□□ 0.2
Clcn1Q64347 Gm8885-201ENSMUST00000189382 598 ntBASIC16.27■□□□□ 0.2
Clcn1Q64347 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.27■□□□□ 0.2
Clcn1Q64347 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn1Q64347 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn1Q64347 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn1Q64347 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Clcn1Q64347 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Clcn1Q64347 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn1Q64347 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn1Q64347 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Clcn1Q64347 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn1Q64347 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn1Q64347 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.26■□□□□ 0.19
Clcn1Q64347 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Gm45743-201ENSMUST00000212701 2795 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Gm25043-201ENSMUST00000158604 212 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Clcn1Q64347 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.26■□□□□ 0.19
Clcn1Q64347 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC16.26■□□□□ 0.19
Clcn1Q64347 Thoc7-209ENSMUST00000225325 765 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Clcn1Q64347 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.26■□□□□ 0.19
Clcn1Q64347 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Clcn1Q64347 Gm42480-201ENSMUST00000198434 2595 ntBASIC16.26■□□□□ 0.19
Clcn1Q64347 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clcn1Q64347 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn1Q64347 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.25■□□□□ 0.19
Clcn1Q64347 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.25■□□□□ 0.19
Clcn1Q64347 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.25■□□□□ 0.19
Clcn1Q64347 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Gm14130-201ENSMUST00000118417 987 ntBASIC16.25■□□□□ 0.19
Clcn1Q64347 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Gm45224-201ENSMUST00000208203 414 ntBASIC16.25■□□□□ 0.19
Clcn1Q64347 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC16.25■□□□□ 0.19
Clcn1Q64347 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.25■□□□□ 0.19
Clcn1Q64347 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.25■□□□□ 0.19
Clcn1Q64347 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.25■□□□□ 0.19
Clcn1Q64347 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn1Q64347 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms