Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim27Q62158 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim27Q62158 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim27Q62158 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Trim27Q62158 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim27Q62158 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.72■□□□□ 0.11
Trim27Q62158 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trim27Q62158 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trim27Q62158 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim27Q62158 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Gm13226-201ENSMUST00000117838 404 ntBASIC15.72■□□□□ 0.11
Trim27Q62158 Gm11591-201ENSMUST00000120063 702 ntBASIC15.72■□□□□ 0.11
Trim27Q62158 Gm15703-201ENSMUST00000120250 880 ntBASIC15.72■□□□□ 0.11
Trim27Q62158 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Gm14760-201ENSMUST00000121831 999 ntBASIC15.72■□□□□ 0.11
Trim27Q62158 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim27Q62158 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim27Q62158 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim27Q62158 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim27Q62158 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim27Q62158 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim27Q62158 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.71■□□□□ 0.11
Trim27Q62158 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.71■□□□□ 0.11
Trim27Q62158 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim27Q62158 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim27Q62158 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trim27Q62158 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim27Q62158 Gm27731-201ENSMUST00000185192 107 ntBASIC15.71■□□□□ 0.11
Trim27Q62158 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim27Q62158 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim27Q62158 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim27Q62158 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim27Q62158 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim27Q62158 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim27Q62158 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim27Q62158 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.71■□□□□ 0.1
Trim27Q62158 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim27Q62158 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.71■□□□□ 0.1
Trim27Q62158 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim27Q62158 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.7■□□□□ 0.1
Trim27Q62158 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim27Q62158 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim27Q62158 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.7■□□□□ 0.1
Trim27Q62158 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim27Q62158 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim27Q62158 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Gm25261-201ENSMUST00000157416 134 ntBASIC15.7■□□□□ 0.1
Trim27Q62158 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim27Q62158 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim27Q62158 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim27Q62158 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim27Q62158 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim27Q62158 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim27Q62158 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim27Q62158 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms