Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rai1Q61818 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.22□□□□□ -0.45
Rai1Q61818 Gm17391-201ENSMUST00000171036 126 ntBASIC12.22□□□□□ -0.45
Rai1Q61818 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.22□□□□□ -0.45
Rai1Q61818 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.22□□□□□ -0.45
Rai1Q61818 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rai1Q61818 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.22□□□□□ -0.45
Rai1Q61818 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rai1Q61818 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rai1Q61818 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.21□□□□□ -0.45
Rai1Q61818 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Rai1Q61818 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.21□□□□□ -0.45
Rai1Q61818 Gm10179-201ENSMUST00000086233 688 ntBASIC12.21□□□□□ -0.45
Rai1Q61818 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.21□□□□□ -0.45
Rai1Q61818 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rai1Q61818 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.46
Rai1Q61818 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rai1Q61818 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.21□□□□□ -0.46
Rai1Q61818 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.21□□□□□ -0.46
Rai1Q61818 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Rai1Q61818 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.21□□□□□ -0.46
Rai1Q61818 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rai1Q61818 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.21□□□□□ -0.46
Rai1Q61818 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.21□□□□□ -0.46
Rai1Q61818 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.2□□□□□ -0.46
Rai1Q61818 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.2□□□□□ -0.46
Rai1Q61818 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.2□□□□□ -0.46
Rai1Q61818 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.2□□□□□ -0.46
Rai1Q61818 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm14644-201ENSMUST00000116671 647 ntBASIC12.2□□□□□ -0.46
Rai1Q61818 Gm15711-201ENSMUST00000118889 535 ntBASIC12.2□□□□□ -0.46
Rai1Q61818 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.2□□□□□ -0.46
Rai1Q61818 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.2□□□□□ -0.46
Rai1Q61818 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.2□□□□□ -0.46
Rai1Q61818 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.2□□□□□ -0.46
Rai1Q61818 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rai1Q61818 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rai1Q61818 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rai1Q61818 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.2□□□□□ -0.46
Rai1Q61818 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rai1Q61818 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rai1Q61818 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms