Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC14.01□□□□□ -0.17
Cln3Q61124 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Gm25116-201ENSMUST00000157191 122 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 Gm23699-201ENSMUST00000158835 135 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cln3Q61124 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Gm43377-201ENSMUST00000201640 455 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Gm29787-201ENSMUST00000222129 849 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.01□□□□□ -0.17
Cln3Q61124 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.01□□□□□ -0.17
Cln3Q61124 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cln3Q61124 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.01□□□□□ -0.17
Cln3Q61124 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cln3Q61124 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cln3Q61124 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14□□□□□ -0.17
Cln3Q61124 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14□□□□□ -0.17
Cln3Q61124 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cln3Q61124 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Cln3Q61124 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Gm14644-201ENSMUST00000116671 647 ntBASIC14□□□□□ -0.17
Cln3Q61124 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14□□□□□ -0.17
Cln3Q61124 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14□□□□□ -0.17
Cln3Q61124 Gm17040-202ENSMUST00000170597 889 ntBASIC14□□□□□ -0.17
Cln3Q61124 Gm8546-201ENSMUST00000178288 1264 ntBASIC14□□□□□ -0.17
Cln3Q61124 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14□□□□□ -0.17
Cln3Q61124 Gm45118-201ENSMUST00000208928 825 ntBASIC14□□□□□ -0.17
Cln3Q61124 CT009718.3-201ENSMUST00000221116 367 ntBASIC14□□□□□ -0.17
Cln3Q61124 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Gm10702-201ENSMUST00000098929 1268 ntBASIC14□□□□□ -0.17
Cln3Q61124 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14□□□□□ -0.17
Cln3Q61124 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14□□□□□ -0.17
Cln3Q61124 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cln3Q61124 Gm11405-201ENSMUST00000118689 1556 ntBASIC14□□□□□ -0.17
Cln3Q61124 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Cln3Q61124 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cln3Q61124 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cln3Q61124 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.99□□□□□ -0.17
Cln3Q61124 Gm12380-201ENSMUST00000119012 544 ntBASIC13.99□□□□□ -0.17
Cln3Q61124 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.99□□□□□ -0.17
Cln3Q61124 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cln3Q61124 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.99□□□□□ -0.17
Cln3Q61124 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.99□□□□□ -0.17
Cln3Q61124 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cln3Q61124 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cln3Q61124 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms