Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.1□□□□□ -0.47
Ripk1Q60855 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.1□□□□□ -0.47
Ripk1Q60855 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
Ripk1Q60855 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.1□□□□□ -0.47
Ripk1Q60855 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.1□□□□□ -0.47
Ripk1Q60855 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.1□□□□□ -0.47
Ripk1Q60855 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ripk1Q60855 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ripk1Q60855 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.1□□□□□ -0.47
Ripk1Q60855 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ripk1Q60855 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ripk1Q60855 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.1□□□□□ -0.47
Ripk1Q60855 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.1□□□□□ -0.47
Ripk1Q60855 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ripk1Q60855 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.09□□□□□ -0.47
Ripk1Q60855 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Gm11814-201ENSMUST00000119515 929 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 Gm13123-201ENSMUST00000122173 492 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ripk1Q60855 Gm24196-201ENSMUST00000179161 110 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Gm10012-201ENSMUST00000078252 192 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ripk1Q60855 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.09□□□□□ -0.47
Ripk1Q60855 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ripk1Q60855 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Ripk1Q60855 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.09□□□□□ -0.47
Ripk1Q60855 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ripk1Q60855 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ripk1Q60855 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.08□□□□□ -0.47
Ripk1Q60855 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.08□□□□□ -0.47
Ripk1Q60855 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ripk1Q60855 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ripk1Q60855 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.08□□□□□ -0.48
Ripk1Q60855 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Ripk1Q60855 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.08□□□□□ -0.48
Ripk1Q60855 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ripk1Q60855 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms