Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Gm8738-201ENSMUST00000172606 329 ntBASIC13.65□□□□□ -0.22
Shroom1Q5SX79 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.65□□□□□ -0.22
Shroom1Q5SX79 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.65□□□□□ -0.22
Shroom1Q5SX79 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.65□□□□□ -0.22
Shroom1Q5SX79 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Shroom1Q5SX79 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Gm13316-201ENSMUST00000140537 691 ntBASIC13.64□□□□□ -0.23
Shroom1Q5SX79 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Shroom1Q5SX79 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Mir7221-201ENSMUST00000184009 72 ntBASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shroom1Q5SX79 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms