Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm17391-201ENSMUST00000171036 126 ntBASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm18041-201ENSMUST00000218210 618 ntBASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Spcs1-203ENSMUST00000226374 592 ntBASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc88aQ5SNZ0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm17040-202ENSMUST00000170597 889 ntBASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm5070-201ENSMUST00000177599 862 ntBASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc88aQ5SNZ0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm2546-201ENSMUST00000182630 991 ntBASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc88aQ5SNZ0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms