Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Gm8100-201ENSMUST00000182906 988 ntBASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps13aQ5H8C4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm9645-201ENSMUST00000197131 792 ntBASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Mir339-201ENSMUST00000083659 96 ntBASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm13916-201ENSMUST00000117368 628 ntBASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm2875-201ENSMUST00000211333 360 ntBASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm7904-201ENSMUST00000217049 465 ntBASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm18968-201ENSMUST00000221319 862 ntBASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Vps13aQ5H8C4 Gm24891-201ENSMUST00000104391 136 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm12857-201ENSMUST00000117678 592 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm13286-201ENSMUST00000117750 537 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm14213-201ENSMUST00000119778 768 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Gm23045-201ENSMUST00000175041 96 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Mir6941-201ENSMUST00000184711 59 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps13aQ5H8C4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms