Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.28■□□□□ 0.04
SfswapQ3USH5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Gm13492-201ENSMUST00000119772 665 ntBASIC15.28■□□□□ 0.04
SfswapQ3USH5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.28■□□□□ 0.04
SfswapQ3USH5 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.28■□□□□ 0.04
SfswapQ3USH5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.28■□□□□ 0.04
SfswapQ3USH5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SfswapQ3USH5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.27■□□□□ 0.04
SfswapQ3USH5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm15236-201ENSMUST00000117309 379 ntBASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm25668-201ENSMUST00000157700 129 ntBASIC15.27■□□□□ 0.04
SfswapQ3USH5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm31256-201ENSMUST00000194705 506 ntBASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm44487-201ENSMUST00000205145 325 ntBASIC15.27■□□□□ 0.04
SfswapQ3USH5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm5950-201ENSMUST00000213337 772 ntBASIC15.27■□□□□ 0.04
SfswapQ3USH5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SfswapQ3USH5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SfswapQ3USH5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.26■□□□□ 0.03
SfswapQ3USH5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.26■□□□□ 0.03
SfswapQ3USH5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Gm14726-201ENSMUST00000120623 896 ntBASIC15.26■□□□□ 0.03
SfswapQ3USH5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.26■□□□□ 0.03
SfswapQ3USH5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SfswapQ3USH5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms