Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Arhgef40Q3UPH7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC18.52■□□□□ 0.55
Arhgef40Q3UPH7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Arhgef40Q3UPH7 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm7666-201ENSMUST00000146631 819 ntBASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm42863-201ENSMUST00000197875 2958 ntBASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm4482-201ENSMUST00000200876 742 ntBASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Gm26035-201ENSMUST00000083065 308 ntBASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Arhgef40Q3UPH7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm21998-201ENSMUST00000117552 1308 ntBASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm25881-201ENSMUST00000157783 103 ntBASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm38210-201ENSMUST00000191944 809 ntBASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm37905-201ENSMUST00000195310 341 ntBASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Gm28719-201ENSMUST00000187779 1757 ntBASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Matn2-206ENSMUST00000228570 2798 ntBASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Arhgef40Q3UPH7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Arhgef40Q3UPH7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms